observation_id	peptide	proforma	protein_accession	protein_name	measured_mz	charge	adduct	theoretical_mz	ppm_error	species	taxon_id	tissue	uberon_id	condition	doi	status	flags
1066	AAFNSGKVDIV	AAFNSGKVDIV	P04406	Glyceraldehyde-3-phosphate dehydrogenase	1120.59964	1	H	1120.5997	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
873	AGAHLQGGAKR	AGAHLQGGAKR	P04406	Glyceraldehyde-3-phosphate dehydrogenase	1065.59114	1	H	1065.5912	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
875	ALDDMISTLK	ALDDMISTLK	P49368	T-complex protein 1 subunit gamma	1106.57613	1	H	1106.57619	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
876	ALLLLCGEDD	ALLLLCGEDD	P08758	Annexin A5	1061.51829	1	H	1061.51834	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1069	ALSTGEKGFGYK	ALSTGEKGFGYK	P62937	Peptidyl-prolyl cis-trans isomerase A	1257.64732	1	H	1257.64738	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1070	ALVKEQGDR	ALVKEQGDR	Q9BR76	Coronin-1B	1015.55303	1	H	1015.55308	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1071	AMSKANSEVAQWR	AMSKANSEVAQWR	P12882	Myosin-1	1477.72155	1	H	1477.72162	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
877	AMTGVEQWPYR	AMTGVEQWPYR	P49368	T-complex protein 1 subunit gamma	1337.63062	1	H	1337.63068	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
879	ANSEVAQWR	ANSEVAQWR	P12882	Myosin-1	1060.51698	1	H	1060.51703	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
880	APDFVFYAPR	APDFVFYAPR	P15311	Ezrin	1182.59417	1	H	1182.59422	-0.04	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
881	APDFVFYAPR	APDFVFYAPR	P26038	Moesin	1182.59417	1	H	1182.59422	-0.04	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
882	APDFVFYAPR	APDFVFYAPR	P35241	Radixin	1182.59417	1	H	1182.59422	-0.04	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1299	APQTQHVSPMR	APQTQHVSPMR	P29692	Elongation factor 1-delta	1251.6262	1	H	1251.62627	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
689	AQEEYVKR	AQEEYVKR	P04075	Fructose-bisphosphate aldolase A	1022.52648	1	H	1022.52654	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
883	AQVEQELTTLR	AQVEQELTTLR	Q15149	Plectin	1287.69024	1	H	1287.69031	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1073	ARPAEVGGMQLR	ARPAEVGGMQLR	P33316	Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial	1284.68405	1	H	1284.68412	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1037	ASCTTNCLAPLAK	ASCTTNCLAPLAK	P04406	Glyceraldehyde-3-phosphate dehydrogenase	1292.63366	1	H	1292.63372	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1360	ASSPGGVYATR	ASSPGGVYATR	P08670	Vimentin	1065.5323	1	H	1065.53235	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1075	ATAPQTQHVSPMR	ATAPQTQHVSPMR	P29692	Elongation factor 1-delta	1423.71099	1	H	1423.71106	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1076	ATSSSSGSLSATGR	ATSSSSGSLSATGR	Q03252	Lamin-B2	1268.60763	1	H	1268.6077	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
885	AVAGNISDPGLQK	AVAGNISDPGLQK	P18206	Vinculin	1269.67968	1	H	1269.67974	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
886	AVGKEELGKNINADEAAAMGAVYQAAALSK	AVGKEELGKNINADEAAAMGAVYQAAALSK	Q9Y4L1	Hypoxia up-regulated protein 1	2990.52501	1	H	2990.52516	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1079	AWGPGLHGGIVGR	AWGPGLHGGIVGR	O75369	Filamin-B	1276.69085	1	H	1276.69092	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1080	AYQKQPTIFQNK	AYQKQPTIFQNK	P62280	Small ribosomal subunit protein uS17	1465.77972	1	H	1465.77979	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
691	DAPEEEDHVLVLR	DAPEEEDHVLVLR	P07237	Protein disulfide-isomerase	1521.75429	1	H	1521.75436	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
888	DGADFAKWR	DGADFAKWR	P04075	Fructose-bisphosphate aldolase A	1065.51117	1	H	1065.51122	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1082	DHPLPEVAHVK	DHPLPEVAHVK	P13073	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	1241.66364	1	H	1241.6637	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1085	DNLAEDIMR	DNLAEDIMR	P08670	Vimentin	1076.50403	1	H	1076.50409	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
890	DQITAGNAAR	DQITAGNAAR	P22234	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	1016.51189	1	H	1016.51195	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
891	DSYVGDEAQSK	DSYVGDEAQSK	P60709	Actin, cytoplasmic 1	1198.52218	1	H	1198.52224	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
892	DSYVGDEAQSK	DSYVGDEAQSK	P63261	Actin, cytoplasmic 2	1198.52218	1	H	1198.52224	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
893	DSYVGDEAQSKR	DSYVGDEAQSKR	P60709	Actin, cytoplasmic 1	1354.62328	1	H	1354.62335	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
894	DSYVGDEAQSKR	DSYVGDEAQSKR	P63261	Actin, cytoplasmic 2	1354.62328	1	H	1354.62335	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1088	DYGVLLEGSGLALR	DYGVLLEGSGLALR	P30048	Thioredoxin-dependent peroxide reductase, mitochondrial	1462.78995	1	H	1462.79002	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
897	EAIEGTYIDKK	EAIEGTYIDKK	P62280	Small ribosomal subunit protein uS17	1266.65755	1	H	1266.65761	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
899	EFQLFSSPHGK	EFQLFSSPHGK	P02787	Serotransferrin	1276.632	1	H	1276.63206	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
900	EGDLIAAQAR	EGDLIAAQAR	P02545	Prelamin-A/C	1043.54794	1	H	1043.548	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1091	EGELTVAQGR	EGELTVAQGR	Q03252	Lamin-B2	1059.54286	1	H	1059.54291	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1092	ELPPDQAEYCIAR	ELPPDQAEYCIAR	P12814	Alpha-actinin-1	1504.70998	1	H	1504.71006	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1094	EQEITAVQAR	EQEITAVQAR	Q9P2E9	Ribosome-binding protein 1	1144.59562	1	H	1144.59568	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
901	ETIEQEKQAGES	ETIEQEKQAGES	P62328	Thymosin beta-4	1348.62261	1	H	1348.62268	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1096	FDAMPFTLR	FDAMPFTLR	Q9UQ80	Proliferation-associated protein 2G4	1097.54478	1	H	1097.54483	-0.04	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
902	FDGILGMAYPR	FDGILGMAYPR	P07339	Cathepsin D	1239.619	1	H	1239.61906	-0.04	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1340	FPSIVGRPR	FPSIVGRPR	P60709	Actin, cytoplasmic 1	1028.59992	1	H	1028.59997	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1341	FPSIVGRPR	FPSIVGRPR	P63261	Actin, cytoplasmic 2	1028.59992	1	H	1028.59997	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1342	FPSIVGRPR	FPSIVGRPR	Q9BYX7	Putative beta-actin-like protein 3	1028.59992	1	H	1028.59997	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1101	FRTEAAAAAPQR	FRTEAAAAAPQR	O95817	BAG family molecular chaperone regulator 3	1288.67559	1	H	1288.67566	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1102	FRYLMGER	FRYLMGER	P00338	L-lactate dehydrogenase A chain	1071.54036	1	H	1071.54041	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1103	FVFSLVDAMNGK	FVFSLVDAMNGK	P40926	Malate dehydrogenase, mitochondrial	1327.67142	1	H	1327.67149	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
905	FYEEVHDLER	FYEEVHDLER	P55209	Nucleosome assembly protein 1-like 1	1336.61674	1	H	1336.61681	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
906	FYEEVHDLERK	FYEEVHDLERK	P55209	Nucleosome assembly protein 1-like 1	1464.7117	1	H	1464.71177	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1104	GAKAEEILEK	GAKAEEILEK	P62913	Large ribosomal subunit protein uL5	1087.59931	1	H	1087.59937	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1106	GATQQILDEAER	GATQQILDEAER	P78371	T-complex protein 1 subunit beta	1330.65967	1	H	1330.65973	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1107	GAVQSGVDKTK	GAVQSGVDKTK	O60664	Perilipin-3	1089.58981	1	H	1089.58986	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1108	GCTATLGNFAK	GCTATLGNFAK	P15880	Small ribosomal subunit protein uS5	1082.52985	1	H	1082.52991	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1109	GGAEGELQALR	GGAEGELQALR	Q15149	Plectin	1100.56941	1	H	1100.56946	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1282	GIHETTFNSIMK	GIHETTFNSIMK	P60709	Actin, cytoplasmic 1	1377.68305	1	H	1377.68311	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1283	GIHETTFNSIMK	GIHETTFNSIMK	P63261	Actin, cytoplasmic 2	1377.68305	1	H	1377.68311	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1284	GIHETTFNSIMK	GIHETTFNSIMK	Q562R1	Beta-actin-like protein 2	1377.68305	1	H	1377.68311	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1112	GLFIIDGKGVLR	GLFIIDGKGVLR	P32119	Peroxiredoxin-2	1287.77827	1	H	1287.77833	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1114	GMDKLIVDGR	GMDKLIVDGR	Q99832	T-complex protein 1 subunit eta	1103.5877	1	H	1103.58776	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1115	GMGPGTPAGYGR	GMGPGTPAGYGR	P23246	Splicing factor, proline- and glutamine-rich	1120.52035	1	H	1120.5204	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1117	GNDVAFHFNPR	GNDVAFHFNPR	P17931	Galectin-3	1273.60718	1	H	1273.60725	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1118	GNLGAGNGNLQGPR	GNLGAGNGNLQGPR	P43243	Matrin-3	1324.67157	1	H	1324.67164	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
910	GPLMMYISK	GPLMMYISK	P13639	Elongation factor 2	1039.53144	1	H	1039.53149	-0.04	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1122	GQGSSPVAMQK	GQGSSPVAMQK	P18206	Vinculin	1089.53566	1	H	1089.53572	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1123	GQGSSPVAMQK	GQGSSPVAMQK	P18206	Vinculin	1089.53566	1	H	1089.53572	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1125	GTGIVSAPVPK	GTGIVSAPVPK	P15880	Small ribosomal subunit protein uS5	1025.59892	1	H	1025.59897	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1127	HGESAWNLENR	HGESAWNLENR	P18669	Phosphoglycerate mutase 1	1312.60282	1	H	1312.60289	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1132	HQGVMVGMGQK	HQGVM[Oxidation]VGMGQK	P60709	Actin, cytoplasmic 1	1187.5659	1	H	1187.56597	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1133	HQGVMVGMGQK	HQGVM[Oxidation]VGMGQK	P63261	Actin, cytoplasmic 2	1187.5659	1	H	1187.56597	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1134	HQGVMVGMGQK	HQGVMVGM[Oxidation]GQK	Q562R1	Beta-actin-like protein 2	1187.5659	1	H	1187.56597	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
911	HRISKEEAMR	HRISKEEAMR	P62913	Large ribosomal subunit protein uL5	1256.65275	1	H	1256.65282	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1136	IEEELGSKAK	IEEELGSKAK	P06733	Alpha-enolase	1103.59422	1	H	1103.59428	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
912	IGDTSVSYKYTSR	IGDTSVSYKYTSR	P20700	Lamin-B1	1476.73283	1	H	1476.7329	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
913	IGFPWSEIR	IGFPWSEIR	P15311	Ezrin	1104.5836	1	H	1104.58366	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
914	IGFPWSEIR	IGFPWSEIR	P26038	Moesin	1104.5836	1	H	1104.58366	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
915	IGFPWSEIR	IGFPWSEIR	P35241	Radixin	1104.5836	1	H	1104.58366	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1137	IIYGGSVTGATCK	IIYGGSVTGATCK	P60174	Triosephosphate isomerase	1269.65069	1	H	1269.65075	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
918	IPDWFLNR	IPDWFLNR	P62269	Small ribosomal subunit protein uS13	1060.55739	1	H	1060.55744	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1138	IQEAGTEVVK	IQEAGTEVVK	P40926	Malate dehydrogenase, mitochondrial	1073.58366	1	H	1073.58372	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
921	ISSPTETER	ISSPTETER	P31949	Protein S100-A11	1019.50033	1	H	1019.50038	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1139	ITEAEKNER	ITEAEKNER	P15311	Ezrin	1089.55342	1	H	1089.55348	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
922	IVSGKDYNVTANSK	IVSGKDYNVTANSK	P00338	L-lactate dehydrogenase A chain	1495.77502	1	H	1495.7751	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
924	IYAMHWGTDSR	IYAMHWGTDSR	P62873	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	1336.61022	1	H	1336.61028	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
925	IYIDSNNNPER	IYIDSNNNPER	Q00610	Clathrin heavy chain 1	1334.63345	1	H	1334.63352	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1141	KAMEAVAAQGK	KAM[Oxidation]EAVAAQGK	P18669	Phosphoglycerate mutase 1	1119.5826	1	H	1119.58267	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1142	KAMEAVAAQGK	KAMEAVAAQGK	P18669	Phosphoglycerate mutase 1	1103.5877	1	H	1103.58776	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
926	KATQASQEY	KATQASQEY	P16104	Histone H2AX	1025.48977	1	H	1025.48982	-0.04	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1143	KCEPIIMTVPR	KCEPIIMTVPR	Q9ULV4	Coronin-1C	1286.69586	1	H	1286.69593	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1287	KETIEQEKQAGES	KETIEQEKQAGES	P62328	Thymosin beta-4	1476.71757	1	H	1476.71764	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1145	KFFVGGNWK	KFFVGGNWK	P60174	Triosephosphate isomerase	1082.57813	1	H	1082.57818	-0.04	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
907	KGKYKEETIEKM	KGKYKEETIEKM	P61254	Large ribosomal subunit protein uL24	1198.71	1	H	1483.78249	-192125.53	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	review	mass_mismatch
927	KKESTNSMETR	KKESTNSMETR	P61758	Prefoldin subunit 3	1310.63682	1	H	1310.63689	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1146	KLDELYGTWR	KLDELYGTWR	P36578	Large ribosomal subunit protein uL4	1280.6633	1	H	1280.66336	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
928	KLDEQYQK	KLDEQYQK	P61758	Prefoldin subunit 3	1051.5418	1	H	1051.54185	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1147	KLLEGEESR	KLLEGEESR	P05787	Keratin, type II cytoskeletal 8	1060.56326	1	H	1060.56331	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1148	KLLEGEESR	KLLEGEESR	P17661	Desmin	1060.56326	1	H	1060.56331	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1149	KLLEGEESR	KLLEGEESR	P41219	Peripherin	1060.56326	1	H	1060.56331	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
794	KNLQTVNVDEN	KNLQTVNVDEN	P62899	Large ribosomal subunit protein eL31	1273.63821	1	H	1273.63827	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
966	KSIYYITGESKEKEQVANSAFVERV	KSIYYITGESKEKEQVANSAFVERV	P08238	Heat shock protein HSP 90-beta	1249.61708	1	H	2875.48361	-565423.68	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	review	mass_mismatch;not_in_protein
1151	KTFSHELSDFGLESTAGEIPVVAIR	KTFSHELSDFGLESTAGEIPVVAIR	P30101	Protein disulfide-isomerase A3	2703.39869	1	H	2703.39882	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1152	KVACIGAWHPAR	KVACIGAWHPAR	Q92901	Ribosomal protein uL3-like	1308.69931	1	H	1308.69937	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1153	LADALQELR	LADALQELR	P02545	Prelamin-A/C	1028.57343	1	H	1028.57349	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1154	LAGDKANYWWLR	LAGDKANYWWLR	P31939	Bifunctional purine biosynthesis protein ATIC	1492.76949	1	H	1492.76956	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1155	LAGLFNEQR	LAGLFNEQR	Q9Y4L1	Hypoxia up-regulated protein 1	1047.55812	1	H	1047.55817	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1164	LFVGNLPADITEDEFKRLFAK	LFVGNLPADITEDEFKRLFAK	P23246	Splicing factor, proline- and glutamine-rich	2423.29681	1	H	2423.29692	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
942	LGIHEDSTNR	LGIHEDSTNR	P08238	Heat shock protein HSP 90-beta	1141.55957	1	H	1141.55963	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1172	LLVVYPWTQR	LLVVYPWTQR	P69892	Hemoglobin subunit gamma-2	1274.8811	1	H	1274.72557	122.01	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/pr3003672	approved	reported_theoretical_differs
944	LLYNNVSNFGR	LLYNNVSNFGR	Q00610	Clathrin heavy chain 1	1296.66945	1	H	1296.66951	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1173	LNDFASTVR	LNDFASTVR	P20674	Cytochrome c oxidase subunit 5A, mitochondrial	1022.52648	1	H	1022.52654	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1175	LQLEACETR	LQLEACETR	Q15149	Plectin	1062.52477	1	H	1062.52482	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
946	LQSSEAEVR	LQSSEAEVR	Q9P2E9	Ribosome-binding protein 1	1018.51631	1	H	1018.51636	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1176	LSEHATAPTR	LSEHATAPTR	P33316	Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial	1082.55884	1	H	1082.5589	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1177	LSVAAQEAAR	LSVAAQEAAR	Q15149	Plectin	1015.55303	1	H	1015.55308	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1182	MAGLKVLQLINDNTATALSYGVFR	MAGLKVLQLINDNTATALSYGVFR	Q9Y4L1	Hypoxia up-regulated protein 1	2595.39619	1	H	2595.39632	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
949	MALDIEIATYR	MALDIEIATYR	P08670	Vimentin	1295.66634	1	H	1295.6664	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
950	MALDIEIATYR	MALDIEIATYR	P41219	Peripherin	1295.66634	1	H	1295.6664	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
951	MALDIEIATYRK	MALDIEIATYRK	P08670	Vimentin	1423.76129	1	H	1423.76136	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
952	MALDIEIATYRK	MALDIEIATYRK	P41219	Peripherin	1423.76129	1	H	1423.76136	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
865	MENANVLAR	MENANVLAR	P04075	Fructose-bisphosphate aldolase A	1017.51454	1	H	1017.51459	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1181	MFGGPGTASRPSSS	M[Oxidation]FGGPGTASRPSSS	P08670	Vimentin	1354.60551	1	H	1354.60559	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1183	MLDMGFEPQIR	MLDMGFEPQIR	Q92841	Probable ATP-dependent RNA helicase DDX17	1336.63874	1	H	1336.63881	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
954	MLGQMTDQVADLR	MLGQMTDQVADLR	P18206	Vinculin	1477.71369	1	H	1477.71376	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
955	MLGQMTDQVADLR	MLGQMTDQVADLR	P18206	Vinculin	1477.71369	1	H	1477.71376	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
795	MPGFAPLTSR	MPGFAPLTSR	Q13885	Tubulin beta-2A chain	1076.55567	1	H	1076.55573	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1184	NDEELNKLLGK	NDEELNKLLGK	P0C0S8	Histone H2A type 1	1272.67934	1	H	1272.67941	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
957	NLGIGKVSSFEEK	NLGIGKVSSFEEK	P40926	Malate dehydrogenase, mitochondrial	1407.74775	1	H	1407.74782	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1186	NLLTAAADAIER	NLLTAAADAIER	P33897	ATP-binding cassette sub-family D member 1	1257.67968	1	H	1257.67974	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
958	NLQEAEEWYK	NLQEAEEWYK	P08670	Vimentin	1309.60585	1	H	1309.60591	-0.04	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
959	NLQEAEEWYK	NLQEAEEWYK	P41219	Peripherin	1309.60585	1	H	1309.60591	-0.04	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
960	NLQTVNVDEN	NLQTVNVDEN	P62899	Large ribosomal subunit protein eL31	1145.54325	1	H	1145.54331	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
961	NQKDPGVLDR	NQKDPGVLDR	P31949	Protein S100-A11	1141.59595	1	H	1141.59601	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1194	QDVDNASLAR	QDVDNASLAR	P08670	Vimentin	1088.53302	1	H	1088.53308	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1197	QLAEAHAQAK	QLAEAHAQAK	Q15149	Plectin	1066.56393	1	H	1066.56398	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1198	QLAEGTAQQR	QLAEGTAQQR	Q15149	Plectin	1101.56465	1	H	1101.56471	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1205	QQYESVAAK	QQYESVAAK	P08670	Vimentin	1023.5105	1	H	1023.51055	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1208	QTMLFSATQTR	QTMLFSATQTR	Q9NVP1	ATP-dependent RNA helicase DDX18	1283.64118	1	H	1283.64125	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1209	QVDQLTNDKAR	QVDQLTNDKAR	P08670	Vimentin	1287.66509	1	H	1287.66515	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1210	QVEVLTNQR	QVEVLTNQR	P17661	Desmin	1086.59014	1	H	1086.5902	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1211	RCLYASVLTAQPR	RCLYASVLTAQPR	P13639	Elongation factor 2	1477.79432	1	H	1477.79439	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1212	RDQALTEEHAR	RDQALTEEHAR	P12814	Alpha-actinin-1	1325.65558	1	H	1325.65565	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1213	RFDAMPFTLR	RFDAMPFTLR	Q9UQ80	Proliferation-associated protein 2G4	1253.64588	1	H	1253.64594	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1216	RIPLAEWESR	RIPLAEWESR	P31930	Cytochrome b-c1 complex subunit 1, mitochondrial	1256.67453	1	H	1256.6746	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1217	RPDQQLQGEGK	RPDQQLQGEGK	Q8NC51	SERPINE1 mRNA-binding protein 1	1255.63887	1	H	1255.63894	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1292	RSYTSGPGSR	RSYTSGPGSR	P05787	Keratin, type II cytoskeletal 8	1067.52279	1	H	1067.52285	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1293	RSYVTTSTR	RSYVTTSTR	P08670	Vimentin	1070.55884	1	H	1070.5589	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
963	SAAQAAAQTNSNAAGK	SAAQAAAQTNSNAAGK	Q8NC51	SERPINE1 mRNA-binding protein 1	1460.70873	1	H	1460.70881	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
964	SAVTTVVNPK	SAVTTVVNPK	P05556	Integrin beta-1	1015.57818	1	H	1015.57824	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1221	SDEGQLSPATR	SDEGQLSPATR	Q15149	Plectin	1160.55415	1	H	1160.55421	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1222	SEIDLFNIR	SEIDLFNIR	P08758	Annexin A5	1106.58399	1	H	1106.58405	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1223	SFAGNLNTYKR	SFAGNLNTYKR	Q01813	ATP-dependent 6-phosphofructokinase, platelet type	1270.6538	1	H	1270.65386	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1355	SFELFADKVPK	SFELFADKVPK	P62937	Peptidyl-prolyl cis-trans isomerase A	1280.68845	1	H	1280.68852	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
965	SFQQSSLSR	SFQQSSLSR	P43243	Matrin-3	1039.51665	1	H	1039.5167	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1225	SGAQASSTPLSPTR	SGAQASSTPLSPTR	P02545	Prelamin-A/C	1359.68621	1	H	1359.68628	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1016	SGGTTMYPGIADR	SGGTTMYPGIADR	P60709	Actin, cytoplasmic 1	1325.61536	1	H	1325.61543	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1017	SGGTTMYPGIADR	SGGTTMYPGIADR	P63261	Actin, cytoplasmic 2	1325.61536	1	H	1325.61543	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1227	SGGYSSGKQGR	SGGYSSGKQGR	Q15084	Protein disulfide-isomerase A6	1083.51771	1	H	1083.51776	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1356	SGKDYNVTANSK	SGKDYNVTANSK	P00338	L-lactate dehydrogenase A chain	1283.62256	1	H	1283.62262	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1228	SGKKLEDGPK	SGKKLEDGPK	P68104	Elongation factor 1-alpha 1	1058.58399	1	H	1058.58405	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1229	SGMFWLRF	SGMFWLRF	P31930	Cytochrome b-c1 complex subunit 1, mitochondrial	1043.51309	1	H	1043.51313	-0.04	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
967	SKEFQLFSSPHGK	SKEFQLFSSPHGK	P02787	Serotransferrin	1491.75898	1	H	1491.75905	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
968	SLAAEEEAAR	SLAAEEEAAR	Q15149	Plectin	1046.51123	1	H	1046.51128	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1233	SLTATGGNHVTAR	SLTATGGNHVTAR	Q14315	Filamin-C	1284.66542	1	H	1284.66549	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
969	SLVSVTKEGLELPEDEEEKKKMEESK	SLVSVTKEGLELPEDEEEKKKMEESK	P08238	Heat shock protein HSP 90-beta	2991.50769	1	H	2991.50784	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1234	SLYASSPGGVY	SLYASSPGGVY	P08670	Vimentin	1100.52582	1	H	1100.52587	-0.04	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1236	SNAQRQEISAAFK	SNAQRQEISAAFK	P08758	Annexin A5	1449.74439	1	H	1449.74447	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
970	SNYNLPMHK	SNYNLPMHK	P36578	Large ribosomal subunit protein uL4	1103.53019	1	H	1103.53024	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1294	SPGGVYATRSS	SPGGVYATRSS	P08670	Vimentin	1081.52721	1	H	1081.52726	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1242	SSLGSHQLPR	SSLGSHQLPR	O95817	BAG family molecular chaperone regulator 3	1081.57483	1	H	1081.57488	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
971	STTTGHLIYK	STTTGHLIYK	P68104	Elongation factor 1-alpha 1	1120.59964	1	H	1120.5997	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1244	STVDAPTAAGR	STVDAPTAAGR	Q99832	T-complex protein 1 subunit eta	1045.52721	1	H	1045.52726	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
972	SVVTGGVQSVMGSR	SVVTGGVQSVMGSR	O60664	Perilipin-3	1363.69975	1	H	1363.69983	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
974	SYKVSTSGPR	SYKVSTSGPR	P05787	Keratin, type II cytoskeletal 8	1081.56359	1	H	1081.56365	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1018	SYNTASNKTR	SYNTASNKTR	P49207	Large ribosomal subunit protein eL34	1141.55957	1	H	1141.55963	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1178	SYNTASNKTR	SYNTASNKTR	P49207	Large ribosomal subunit protein eL34	1141.55957	1	H	1141.55963	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1245	TALINSTGEEVAMR	TALINSTGEEVAMR	P02545	Prelamin-A/C	1491.74709	1	H	1491.74717	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1246	TAQEVETYRR	TAQEVETYRR	P17844	Probable ATP-dependent RNA helicase DDX5	1252.62798	1	H	1252.62804	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
975	TASTNNIAQAR	TASTNNIAQAR	Q9UBI6	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12	1146.58611	1	H	1146.58618	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
976	TAVCDIPPRGLK	TAVCDIPPRGLK	Q13885	Tubulin beta-2A chain	1269.6983	1	H	1269.69837	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1019	TEAPLNPKANREK	TEAPLNPKANREK	P60709	Actin, cytoplasmic 1	1467.79134	1	H	1467.79142	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1020	TEAPLNPKANREK	TEAPLNPKANREK	P63261	Actin, cytoplasmic 2	1467.79134	1	H	1467.79142	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1021	TEAPLNPKANREK	TEAPLNPKANREK	Q9BYX7	Putative beta-actin-like protein 3	1467.79134	1	H	1467.79142	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
977	TGQIKEVER	TGQIKEVER	Q00610	Clathrin heavy chain 1	1059.57924	1	H	1059.5793	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
978	THILLFLPK	THILLFLPK	P07237	Protein disulfide-isomerase	1081.67677	1	H	1081.67683	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
979	TKEVYELLDSPGK	TKEVYELLDSPGK	P22234	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	1478.77363	1	H	1478.7737	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1252	TLIQNCGASTIR	TLIQNCGASTIR	P49368	T-complex protein 1 subunit gamma	1276.66773	1	H	1276.6678	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1253	TLKLTTPTYGDLNHLVSATMSGVTTCLR	TLKLTTPTYGDLNHLVSATMSGVTTCLR	Q13885	Tubulin beta-2A chain	2993.54331	1	H	2993.54345	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1254	TLLIKTVETRDGQVINETSQHHDDLE	TLLIKTVETRDGQVINETSQHHDDLE	P08670	Vimentin	2991.50163	1	H	2991.50178	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
980	TLVDIAKSQDAEVGDGTTSVTLLAAEFLK	TLVDIAKSQDAEVGDGTTSVTLLAAEFLK	Q99832	T-complex protein 1 subunit eta	2992.57234	1	H	2992.57249	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
740	TPQQAQEVHEK	TPQQAQEVHEK	P60174	Triosephosphate isomerase	1294.63854	1	H	1294.6386	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
981	TVMPYISTTPAK	TVMPYISTTPAK	P05556	Integrin beta-1	1308.68674	1	H	1308.6868	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1255	TYSLGSALRPST	TYSLGSALRPST	P08670	Vimentin	1252.65313	1	H	1252.65319	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1256	TYSLGSALRPSTSR	TYSLGSALRPSTSR	P08670	Vimentin	1495.78625	1	H	1495.78633	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1257	TYSLGSALRPSTSRSLYASSPGGVYATR	TYSLGSALRPSTSRSLYASSPGGVYATR	P08670	Vimentin	2905.48011	1	H	2905.48026	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
983	VAEIEHAEKEK	VAEIEHAEKEK	P78371	T-complex protein 1 subunit beta	1282.66369	1	H	1282.66376	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
984	VAETANEEEVKK	VAETANEEEVKK	P61221	ATP-binding cassette sub-family E member 1	1346.67973	1	H	1346.6798	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
985	VAHALAEGLGVIACIGEKLDEREAGITEK	VAHALAEGLGVIACIGEKLDEREAGITEK	P60174	Triosephosphate isomerase	2992.57705	1	H	2992.5772	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
986	VAVTEGCQPSR	VAVTEGCQPSR	O75369	Filamin-B	1146.55713	1	H	1146.55718	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1260	VGDYGSLSGREK	VGDYGSLSGREK	Q9UBR2	Cathepsin Z	1267.62764	1	H	1267.62771	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
989	VIHDNFGIVEGLMTTVHAITATQK	VIHDNFGIVEGLMTTVHAITATQK	P04406	Glyceraldehyde-3-phosphate dehydrogenase	2595.35981	1	H	2595.35993	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1262	VITIMQNPR	VITIMQNPR	P62269	Small ribosomal subunit protein uS13	1071.59787	1	H	1071.59793	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1263	VQREKANGTTV	VQREKANGTTV	P61254	Large ribosomal subunit protein uL24	1202.64871	1	H	1202.64878	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1264	VRGEVAPDAK	VRGEVAPDAK	P09382	Galectin-1	1041.56868	1	H	1041.56873	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1265	VSVADHSLHLSK	VSVADHSLHLSK	Q13162	Peroxiredoxin-4	1292.69566	1	H	1292.69573	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1266	VVACNLYPFVK	VVACNLYPFVK	P31939	Bifunctional purine biosynthesis protein ATIC	1252.67578	1	H	1252.67584	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1267	VVDLMAHMASKE	VVDLMAHM[Oxidation]ASKE	P04406	Glyceraldehyde-3-phosphate dehydrogenase	1346.6442	1	H	1346.64428	-0.06	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1268	VVDLMAHMASKE	VVDLMAHMASKE	P04406	Glyceraldehyde-3-phosphate dehydrogenase	1330.6493	1	H	1330.64937	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1269	VVHIMDFQR	VVHIMDFQR	P43243	Matrin-3	1144.59312	1	H	1144.59318	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1270	VVSSIEQKTEGAEK	VVSSIEQKTEGAEK	P63104	14-3-3 protein zeta/delta	1504.78525	1	H	1504.78533	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1271	VWQVTIGTR	VWQVTIGTR	P63244	Small ribosomal subunit protein RACK1	1059.5945	1	H	1059.59456	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1272	WLQGSQELPR	WLQGSQELPR	P01877	Immunoglobulin heavy constant alpha 2	1213.7753	1	H	1213.6324	117.75	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/pr3003672	approved	reported_theoretical_differs
1274	WQAVLAQTDVR	WQAVLAQTDVR	Q15149	Plectin	1286.6851	1	H	1286.68516	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1276	YALYDATYETK	YALYDATYETK	P23528	Cofilin-1	1337.62591	1	H	1337.62597	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1277	YISPDQLADLYK	YISPDQLADLYK	P06733	Alpha-enolase	1425.72596	1	H	1425.72602	-0.04	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
1278	YLSEVASGDNK	YLSEVASGDNK	P31946	14-3-3 protein beta/alpha	1182.56365	1	H	1182.56371	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs
851	YYGYTGAFR	YYGYTGAFR	P02787	Serotransferrin	1097.50502	1	H	1097.50507	-0.05	Homo sapiens	9606	Breast	UBERON:0000310	Breast tumour	10.1021/ac504503x	approved	reported_theoretical_differs